BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005F03LP1|AL425401
(994 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1263 1941 0.0
3x_Contig1624 177 5e-44
3x_Contig1503 177 5e-44
3x_Contig1722 165 2e-40
3x_Contig869 165 2e-40
>3x_Contig1263
Length = 6840
Score = 1941 bits (978), Expect = 0.0
Identities = 990/994 (99%), Gaps = 1/994 (0%)
Strand = Plus / Plus
Query: 1 gatcttgcttcgagggcacaaagatatatggaacagattggtcttcacacaaaactggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4583 gatcttgcttcgagggcacaaagatatatggaacagattggtcttcacacaaaactggca 4642
Query: 61 agtgagaaataacatcttgtgggaaaatatcaccagcaatgactactaaccctttatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4643 agtgagaaataacatcttgtgggaaaatatcaccagcaatgactactaaccctttatcac 4702
Query: 121 cctttctcaaagccttgacaacctctttgacacctcttttgacattcttagccttggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4703 cctttctcaaagccttgacaacctctttgacacctcttttgacattcttagccttggaag 4762
Query: 181 ccttcttgacggtctttaacacctttttgttcagtttctttgatgctagaggttttgcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4763 ccttcttgacggtctttaacacctttttgttcagtttctttgatgctagaggttttgcaa 4822
Query: 241 atggtagaacggcaggaagtctagcttcgtagttgtcttctgttgatacactcttatcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4823 atggtagaacggcaggaagtctagcttcgtagttgtcttctgttgatacactcttatcct 4882
Query: 301 tggccatctttgttattatgtatagttcttcactgttcccctggttcaaatagagcgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4883 tggccatctttgttattatgtatagttcttcactgttcccctggttcaaatagagcgagc 4942
Query: 361 aattgattgagaaaggaatcaatatcacatcagcaagataggttcatcgattcattcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4943 aattgattgagaaaggaatcaatatcacatcagcaagataggttcatcgattcattcaac 5002
Query: 421 agttcaattctcatactcatcgctcttctttttgttaacaaaaaatgaaaattttccagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5003 agttcaattctcatactcatcgctcttctttttgttaacaaaaaatgaaaattttccagt 5062
Query: 481 accgagtaacatgaaaaagaaataaagtatcaattacagtagggacgacataaattaatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5063 accgagtaacatgaaaaagaaataaagtatcaattacagtagggacgacataaattaatc 5122
Query: 541 catgcgacacataaacaacttttcagaatatcgtgccagcgtcttgtttcggaggtggta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5123 catgcgacacataaacaacttttcagaatatcgtgccagcgtcttgtttcggaggtggta 5182
Query: 601 catagcagttgtagaaatgtccatcgcctaacattattctggatgagtccctttaatttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5183 catagcagttgtagaaatgtccatcgcctaacattattctggatgagtccctttaatttc 5242
Query: 661 atacaaaacttggagttttaaatggcgaacaatatgtacaatgattaaactctgtaggag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5243 atacaaaacttggagttttaaatggcgaacaatatgtacaatgattaaactctgtaggag 5302
Query: 721 aaattagctgttccaggtgcagggcattattgtcctgtgatcacttcacttgtataatta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5303 aaattagctgttccaggtgcagggcattattgtcctgtgatcacttcacttgtataatta 5362
Query: 781 aatactttaaaaggtttaaatactccatatacctcttaatgtcaggcaatgtagtcttag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5363 aatactttaaaaggtttaaatactccatatacctcttaatgtcaggcaatgtagtcttag 5422
Query: 841 taaaccttgaagtttggttatagcatcattgaaaattacaacacacaagtaacttctctc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5423 taaaccttgaagtttggttatagcatcattgaaaattacaacacacaagtaacttctctc 5482
Query: 901 ggtagccaagttggtttaakgcgccagactgttatttg-aaacacaaagcaatttgtwat 959
||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||| ||
Sbjct: 5483 ggtagccaagttggtttaaggcgccagactgtaatttgaaaacacaaagcaatttgtaat 5542
Query: 960 ctggagatcgggcgttcgactcgcccccgggaga 993
||||||||||||||||||||||||||||||||||
Sbjct: 5543 ctggagatcgggcgttcgactcgcccccgggaga 5576
>3x_Contig1624
Length = 12551
Score = 177 bits (89), Expect = 5e-44
Identities = 104/109 (95%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 886 caagtaacttctctcggtagccaagttggtttaakgcgccagactgttatttgaaa-cac 944
||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| |||
Sbjct: 6102 caagtaactcctctcggtagccaagttggtttaaggcgccagactgtaatttgaaaacac 6043
Query: 945 aaagcaatttgtwatctggagatcgggcgttcgactcgcccccgggaga 993
|||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6042 aaagcaatttgtaatctggagatcgggcgttcgactcgcccccgggaga 5994
>3x_Contig1503
Length = 10719
Score = 177 bits (89), Expect = 5e-44
Identities = 104/109 (95%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 886 caagtaacttctctcggtagccaagttggtttaakgcgccagactgttatttgaaa-cac 944
||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| |||
Sbjct: 3600 caagtaactcctctcggtagccaagttggtttaaggcgccagactgtaatttgaaaacac 3541
Query: 945 aaagcaatttgtwatctggagatcgggcgttcgactcgcccccgggaga 993
|||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3540 aaagcaatttgtaatctggagatcgggcgttcgactcgcccccgggaga 3492
>3x_Contig1722
Length = 17718
Score = 165 bits (83), Expect = 2e-40
Identities = 95/99 (95%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 896 ctctcggtagccaagttggtttaakgcgccagactgttatttgaaa-cacaaagcaattt 954
|||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||
Sbjct: 5776 ctctcggtagccaagttggtttaaggcgccagactgtaatttgaaaacacaaagcaattt 5717
Query: 955 gtwatctggagatcgggcgttcgactcgcccccgggaga 993
|| ||||||||||||||||||||||||||||||||||||
Sbjct: 5716 gtaatctggagatcgggcgttcgactcgcccccgggaga 5678
>3x_Contig869
Length = 2873
Score = 165 bits (83), Expect = 2e-40
Identities = 95/99 (95%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 896 ctctcggtagccaagttggtttaakgcgccagactgttatttgaaa-cacaaagcaattt 954
|||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||
Sbjct: 1863 ctctcggtagccaagttggtttaaggcgccagactgtaatttgaaaacacaaagcaattt 1922
Query: 955 gtwatctggagatcgggcgttcgactcgcccccgggaga 993
|| ||||||||||||||||||||||||||||||||||||
Sbjct: 1923 gtaatctggagatcgggcgttcgactcgcccccgggaga 1961
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8047
Number of Sequences: 1807
Number of extensions: 8047
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 5
length of query: 994
length of database: 10,358,551
effective HSP length: 16
effective length of query: 978
effective length of database: 10,329,639
effective search space: 10102386942
effective search space used: 10102386942
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)